Information for 5-KTWTWGTCYCTKAAAT (Motif 17)

A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
Reverse Opposite:
G T C A A G C T A C G T G A C T G T C A C T G A C A T G C T G A T C A G C G T A T G A C C G T A C G T A C G A T C G T A T G C A
p-value:1e-6
log p-value:-1.604e+01
Information Content per bp:1.628
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif717.3
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets45.6 +/- 20.5bp
Average Position of motif in Background51.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0183.1_Sry_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---KTWTWGTCYCTKAAAT
CNNNTATTGTTCNNNNN--
 A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KTWTWGTCYCTKAAAT
NNTTTATTGTTCTNNN---
 A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------KTWTWGTCYCTKAAAT
TNNANNTCTATTGTTNTNNANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---KTWTWGTCYCTKAAAT
AATCAATTGTTCCGCTA--
 A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-KTWTWGTCYCTKAAAT
NCCATTGTTY-------
 A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---KTWTWGTCYCTKAAAT
AANTTATTGTTCTNNA---
 A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----KTWTWGTCYCTKAAAT
GTATCTATTGTTCTTTA---
 A C G T A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----KTWTWGTCYCTKAAAT
ANNTCTATTGTTCNNNA---
 A C G T A C G T A C G T A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KTWTWGTCYCTKAAAT
CCATTGTTNY------
 A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KTWTWGTCYCTKAAAT
CTCATTGTC--------
 A C G T A C G T G C A T G C T A C G A T C G A T A C T G A C G T A G T C A G C T G T A C G A C T C A G T C T G A T G C A T C G A A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T