Information for 5-GCAAYTVACC (Motif 15)

C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C
Reverse Opposite:
A C T G T A C G A C G T A C G T C G T A T C G A A C G T A C G T C T A G G T A C
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.779
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif74.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets34.6 +/- 23.9bp
Average Position of motif in Background49.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCAAYTVACC--
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCAAYTVACC
CCAATTAA--
 C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCAAYTVACC
CCAATTAA--
 C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAAYTVACC
GCCAATTAAC-
 A C G T C A T G A G T C C G T A C G T A A G C T A C G T T G C A G T C A A T G C A G T C
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T