Information for 3-GTGTGAGARRWGTRCA (Motif 10)

A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
Reverse Opposite:
A C G T A C T G A G C T C G T A A G T C C G A T A G T C A G C T A C G T A G T C A C G T A G T C G T C A A G T C C G T A T G A C
p-value:1e-9
log p-value:-2.173e+01
Information Content per bp:1.789
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 22.5bp
Average Position of motif in Background50.1 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTGTGAGARRWGTRCA-
---GGAGAAAGGTGCGA
 A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGARRWGTRCA
AGGTGTGA----------
 A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGARRWGTRCA
AGGTGHCAGACA------
 A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGARRWGTRCA
AGGTGTGA----------
 A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAGARRWGTRCA
AAGGTGTGAAAAT------
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTGTGAGARRWGTRCA
GTGGGGGAGGGG----
 A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAGARRWGTRCA
AAGGTGTGAAA--------
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGARRWGTRCA
AGGTGTGAAA--------
 A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGAGARRWGTRCA
AGGTGNCAGACAG-----
 A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGARRWGTRCA
AGGTGTGA----------
 A C G T A C G T A C T G A C G T A C T G A C G T C T A G C G T A A C T G C G T A C T G A C T A G C G T A A C T G G A C T C T G A A G T C G T C A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T