Information for 7-TCTGAGTAGCTAG (Motif 9)

A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G G T A C A C G T C G T A G A T C A C G T T G A C C T G A A C T G C G T A
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 14.9bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAGTAGCTAG-
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAGTAGCTAG-
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTGAGTAGCTAG-
--TGATTGGCTANN
 A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCTGAGTAGCTAG----
--NNNGTAACTANGNNA
 A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCTGAGTAGCTAG-----
-GANGTTAACTAGTTTNN
 A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCTGAGTAGCTAG--
---CTGTTGCTAGGS
 A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PH0032.1_Evx2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAGTAGCTAG-
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAGTAGCTAG--
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCTGAGTAGCTAG-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTGAGTAGCTAG
CTTGAGTGGCT--
 A C G T A G T C A G C T A C T G C G T A C T A G A C G T C G T A A C T G G T A C A C G T C G T A A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T