Information for 2-TACATGTATTTTGCAA (Motif 5)

A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
Reverse Opposite:
A C G T G A C T C A T G A T G C C G T A C G T A C G T A C G T A A C G T G C T A A T G C C G T A A C G T A C T G A C G T C T G A
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 24.2bp
Average Position of motif in Background47.7 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGTATTTTGCAA
ANTNTTACATGTATNTA----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGTATTTTGCAA
ANTTNTACATGTANTTN----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGTATTTTGCAA
NNTATTACATGTANNNT----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGTATTTTGCAA
ANTNNTACATGTANNTN----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGTATTTTGCAA
ANTATTACATGTANNNN----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGTATTTTGCAA
NNTTTTACATGTANNNT----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TACATGTATTTTGCAA
---ATGAATATTC---
 A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TACATGTATTTTGCAA
-WYATGCATWATGCAT
 A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
A C G T C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TACATGTATTTTGCAA---
----ANATTTTTGCAANTN
 A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACATGTATTTTGCAA
CTCATGAATATTCAT-
 A G C T C G T A A G T C C G T A A C G T A T C G C A G T C G T A A C G T C G A T A C G T A C G T A T C G G A T C C G T A C G T A
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T