Information for 2-AGCAAGCTGA (Motif 12)

G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A
Reverse Opposite:
A C G T T G A C C G T A A C T G A G T C G A C T C G A T A T C G A G T C C G A T
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.672
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif829.7
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets56.4 +/- 27.4bp
Average Position of motif in Background50.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGCAAGCTGA--
--CCTGCTGAGH
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCAAGCTGA--
AAAATGCTGACT
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCAAGCTGA
--CAAGCTT-
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCAAGCTGA-
AATTTGCTGAC
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCAAGCTGA----
----TGCTGACTCA
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCAAGCTGA---
-GWAAYHTGABMC
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAGCTGA----
AAAWWTGCTGACWWD
 A C G T G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGCAAGCTGA
----NGCTN-
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCAAGCTGA--
--HCAGCTGDTN
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCAAGCTGA-----
AAANTGCTGACTNAG
 G C T A T C A G T A G C G C T A C T G A T C A G T G A C G C A T A C T G T G C A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G