Information for 9-GCWGAARGAMAAS (Motif 11)

A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A C T G A G C T A T G C A G C T A C G T A C G T A G T C C G A T A C T G A T G C
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 16.7bp
Average Position of motif in Background55.9 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCWGAARGAMAAS--
-GAGAACCGAAACTG
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T A C G T
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCWGAARGAMAAS----
GTTAAAAAAAAAAATTA
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCWGAARGAMAAS
-CGGAAGTGAAAC
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCWGAARGAMAAS-
--AGAAACGAAAGT
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCWGAARGAMAAS
---CAAGGHCANV
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCWGAARGAMAAS
TGGCACCATGCCAA-
 A C G T A C G T A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCWGAARGAMAAS-
---NNGAGATAAGA
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCWGAARGAMAAS-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCWGAARGAMAAS-
--GAAAMTGAAACT
 A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCWGAARGAMAAS-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A T C G A G T C C G T A A C T G C G T A C G T A C T G A A T C G C T G A G T A C C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A