Information for 19-CCCGGAGSCCTGG (Motif 33)

A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G A T C G A G T C A C G T A G T C A G T C A T C G A C T G A C T G
p-value:1e-6
log p-value:-1.510e+01
Information Content per bp:1.894
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.8 +/- 21.7bp
Average Position of motif in Background47.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:CCCGGAGSCCTGG
-----AGGCCTNG
 A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CCCGGAGSCCTGG
-----AGGCCTAG
 A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCCGGAGSCCTGG-----
----CAGGCCNNGGCCNN
 A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGSCCTGG
TGCCCCCGGGCA---
 A C G T A C G T A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGAGSCCTGG---
NNNNTGAGCACTGTNNG
 A C G T A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCCGGAGSCCTGG-
----GAGSCCGAGC
 A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCCGGAGSCCTGG
ATGCCCTGAGGC----
 A C G T A C G T A C G T A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCCGGAGSCCTGG
--CGGAGC-----
 A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCGGAGSCCTGG-------
----GAGCCCTTGTCCCTAA
 A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGSCCTGG
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A T G C T A C G A C T G C G T A A C T G T A G C A G T C A G T C A C G T A C T G A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T