Information for 9-TGATCCCAAABGT (Motif 19)

A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
Reverse Opposite:
C G T A G T A C T A G C A C G T C G A T C G A T A C T G A C T G A C T G C G T A A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 26.1bp
Average Position of motif in Background52.1 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAAABGT
ATAATCCC------
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGATCCCAAABGT
TGTCGTGACCCCTTAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAAABGT
NNANTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAAABGT
NNNNTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAAABGT
TTAATCCC------
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGATCCCAAABGT
CTTAATCCC------
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGATCCCAAABGT
AGGCTAATCCCCAANG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAAABGT
ANANNTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAAABGT
ANNNATGATACCCCATC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGATCCCAAABGT
TAATCCCN-----
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C A T G C G A T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T