Information for 3-KCTACCAKATWTATGC (Motif 4)

A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A A G C T G C T A C G A T C T G A A G C T G T A C C G A T A C T G C A T G G A C T C T G A A C T G T G A C
p-value:1e-12
log p-value:-2.796e+01
Information Content per bp:1.761
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 32.4bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----KCTACCAKATWTATGC
ACATGCTACCTAATAC----
 A C G T A C G T A C G T A C G T A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----KCTACCAKATWTATGC
ACTTGCTACCTACACC----
 A C G T A C G T A C G T A C G T A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----KCTACCAKATWTATGC
CNNNGCTACTGTANNN----
 A C G T A C G T A C G T A C G T A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-KCTACCAKATWTATGC----
ANTTMRCASBNNNGTGYKAAN
 A C G T A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:KCTACCAKATWTATGC
-ATGCCAGACN-----
 A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----KCTACCAKATWTATGC
TNNTGCTACTGTNNNN----
 A C G T A C G T A C G T A C G T A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.48
Offset:3
Orientation:forward strand
Alignment:KCTACCAKATWTATGC
---ACCATATGTT---
 A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:KCTACCAKATWTATGC-----
------ANATTTTTGCAANTN
 A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:KCTACCAKATWTATGC
--NAACATATGTTT--
 A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
A C G T A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:KCTACCAKATWTATGC
GCGACCACACTG----
 A C T G G T A C A G C T C G T A G T A C T G A C C G T A A C T G T C G A G A C T C G T A C G A T T C G A A C G T A C T G A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T