Information for 4-KTTRGGGCWAGRW (Motif 5)

A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T
Reverse Opposite:
C G T A A G C T A G T C A C G T C G A T A C T G A G T C A G T C A G T C A G C T C G T A C G T A G T A C
p-value:1e-13
log p-value:-3.152e+01
Information Content per bp:1.851
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.2 +/- 15.8bp
Average Position of motif in Background66.6 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KTTRGGGCWAGRW
-TNNGGGCAG---
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:KTTRGGGCWAGRW--
---AGGTCAAGGTCA
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KTTRGGGCWAGRW-
---AAGGCAAGTGT
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:KTTRGGGCWAGRW
---AGGCCTAG--
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--KTTRGGGCWAGRW-
NNNNTTGGGCACNNCN
 A C G T A C G T A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KTTRGGGCWAGRW--
---AGGTCAAGGTCA
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KTTRGGGCWAGRW---
NNAGGGGCGGGGTNNA
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--KTTRGGGCWAGRW--
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:KTTRGGGCWAGRW
---AGGCCTNG--
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:KTTRGGGCWAGRW---
NNAGGGACAAGGGCNC
 A C T G A C G T A C G T C T G A A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G A T A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C