Information for 16-CYTGTGYATA (Motif 46)

A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A
Reverse Opposite:
C G A T C G T A C G A T C T A G A G T C C G T A G A T C C G T A C T A G A C T G
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.800
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif559.4
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets50.5 +/- 25.7bp
Average Position of motif in Background50.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CYTGTGYATA----
TNNATTATGCATANNTT
 A C G T A C G T A C G T A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CYTGTGYATA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CYTGTGYATA-
--TATGCAAAT
 A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CYTGTGYATA-
--TATGCAAAT
 A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CYTGTGYATA
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CYTGTGYATA-
-TTATGCAAAT
 A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CYTGTGYATA-
TTCATTTGCATAT
 A C G T A C G T A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CYTGTGYATA---
-TTATGCAAATTA
 A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T A C G T
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CYTGTGYATA-
-ATTTGCATAT
 A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CYTGTGYATA--
AATATGCAAATT
 A G T C A G T C A C G T C T A G A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T