Information for 16-CCCGGCTAAAGGCCCA (Motif 27)

A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A
Reverse Opposite:
A C G T C T A G A C T G A C T G A G T C A T G C A C G T A C G T C G A T C T G A A C T G A G T C G T A C A C T G A C T G A C T G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 25.4bp
Average Position of motif in Background54.5 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA-
---------AGGCCTAG
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA-
---------AGGCCTNG
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA---
---GGCAAAAGTCCAATAA
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA
CTTGGCANNNTGCCAA
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA
-----NTCAAGGTCA-
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCCGGCTAAAGGCCCA
----GTTAATGGCC--
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CCCGGCTAAAGGCCCA------
--------CAGGCCNNGGCCNN
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA
-----CTAATKGV---
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA
----GCTAATTGCT--
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CCCGGCTAAAGGCCCA-
---GGAGAAAGGTGCGA
 A G T C A G T C A G T C A C T G A C T G A G T C A G C T G C T A C G T A C G T A A T C G A C T G G T A C A G T C A G T C G T C A A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A