Information for 15-SNBCTGCTYCGCCNSN (Motif 25)

T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
Reverse Opposite:
A C G T T A C G C A G T C A T G T A C G T A G C T A C G T C G A C T G A T A C G T A G C C G T A A T C G T A G C C T G A A T C G
p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.330
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 25.7bp
Average Position of motif in Background20.9 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:SNBCTGCTYCGCCNSN
-----GCTTCC-----
 T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SNBCTGCTYCGCCNSN-
-----GCTCCGCCCMCY
 T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SNBCTGCTYCGCCNSN
-----GCTCCG-----
 T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--SNBCTGCTYCGCCNSN
AGCAGCTGCT--------
 A C G T A C G T T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---SNBCTGCTYCGCCNSN
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SNBCTGCTYCGCCNSN
AGCAGCTGCTNN------
 A C G T A C G T T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-SNBCTGCTYCGCCNSN
CCCCCTGCTGTG-----
 A C G T T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:SNBCTGCTYCGCCNSN
----GGCCCCGCCCCC
 T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-SNBCTGCTYCGCCNSN
TCNCCTGCTGNGNNN--
 A C G T T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SNBCTGCTYCGCCNSN
CAGCTGNT--------
 T A G C G A C T A T C G T A G C G C A T A T C G A T G C G A C T A G C T A T G C A T C G A T G C G T A C G T C A A T G C T G C A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T