Information for 3-CCCTGACCAT (Motif 19)

A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T
Reverse Opposite:
C T G A G A C T A T C G A C T G A C G T A T G C G T C A C A T G A C T G C T A G
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif120.4
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets50.2 +/- 29.3bp
Average Position of motif in Background55.5 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGACCAT
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGACCAT
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGACCAT--
CNNTTGACCTTTG
 A C G T A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCTGACCAT
---TGACCT-
 A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGACCAT-----
NNNNTGACCTTTNNNN
 A C G T A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCCTGACCAT--
--NTGACCTTGA
 A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCTGACCAT--
--CTGACCTTTG
 A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T A C G T A C G T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCTGACCAT--
--ATGACCTTGA
 A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T A C G T A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCCTGACCAT---
---TGACCTTGAT
 A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTGACCAT
NCGTGACN--
 A G T C G T A C G T A C A C G T A T C G C G T A T G A C A T G C C T G A A G C T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T