Information for 9-GCCWGGCGGCGCA (Motif 17)

A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A
Reverse Opposite:
G C A T T A C G G A T C T C A G T A G C T G A C A T C G A T G C A G T C C G T A C A T G T A C G G T A C
p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.727
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.1 +/- 20.8bp
Average Position of motif in Background34.7 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCWGGCGGCGCA
TGTCAGGGGGCG--
 A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCWGGCGGCGCA
TGCCCNGGGGCA--
 A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCWGGCGGCGCA----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCWGGCGGCGCA----
--AAGGKGRCGCAGGCA
 A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCWGGCGGCGCA
TGCCCTNGGGCA--
 A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCWGGCGGCGCA
TGCCCTNGGGCA--
 A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCWGGCGGCGCA--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCCWGGCGGCGCA--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCCWGGCGGCGCA-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCWGGCGGCGCA--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A G T C G T A C G C A T A C T G A T C G A T G C A C T G A T C G A G T C C T A G A T G C C G T A A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G