Information for 8-RTKGCASRTGTAC (Motif 12)

C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C C G T A A G T C A T C G A C G T A C T G A G T C G T C A G T C A A G C T
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 18.2bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas2/MA0626.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:RTKGCASRTGTAC
--GGCACGTGTC-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:RTKGCASRTGTAC
---GCACGTGT--
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
--GACAGGTGTN-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
--NNCAGGTGTN-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
----CACGTGBN-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
--GGCACGTGTC-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
-SDGCAGGTGCNS
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
--AACACGTGTT-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
--NNCAGGTGCG-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RTKGCASRTGTAC
--NGCACGTGNT-
 C T G A A C G T A C G T A C T G A G T C C G T A A T G C C T A G A C G T A C T G A C G T C G T A A G T C
A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T