Information for 6-AGAATGCATTBTACAA (Motif 11)

C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
Reverse Opposite:
A C G T C G A T A T C G A G C T G T C A T A C G G T C A C G T A G C A T C A T G A G T C C G T A A C G T A C G T A T G C A C G T
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.712
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 23.8bp
Average Position of motif in Background63.4 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAATGCATTBTACAA
GACAATGNN--------
 A C G T C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAATGCATTBTACAA--
---ATGCATWATGCATRW
 C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAATGCATTBTACAA
ACAAAG----------
 C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAATGCATTBTACAA
ACAAAGGNBCCT----
 C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAATGCATTBTACAA
---ATGCATAATTCA-
 C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGAATGCATTBTACAA
VRRACAAWGG---------
 A C G T A C G T A C G T C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGAATGCATTBTACAA
VRAACAATGG---------
 A C G T A C G T A C G T C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGAATGCATTBTACAA
AATGAACAATGGAATT-----
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAATGCATTBTACAA
TACCCACAATGCATTG-----
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGAATGCATTBTACAA
RAACAATGGN--------
 A C G T A C G T C G T A T A C G G T C A C G T A A C G T A C T G G A T C C G T A C G A T A C G T A T G C A C G T T C G A T A G C G C T A T C G A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T