Information for 5-RGWGKWAMAGTGKGWY (Motif 10)

T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
C T A G C G A T A G T C G T C A A G T C C G T A A G T C A C G T C A G T A C G T C G A T G T A C A G T C C G T A A T G C A G C T
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 33.8bp
Average Position of motif in Background71.8 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY
-YDGHTACAWTGTADC
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RGWGKWAMAGTGKGWY
----NTCAAGTGGN--
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY
-TWGHWACAWTGTWDC
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RGWGKWAMAGTGKGWY
----NTCAAGTGG---
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY---
---TGCGGAGTGGGACTGG
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY---
------AAGGTGTGAAAAT
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY
------AAGGTGTGAA
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY
-------AGGTGTGA-
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RGWGKWAMAGTGKGWY
AGAAAGTGAAAGTGA---
 A C G T A C G T T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:RGWGKWAMAGTGKGWY
-------AGGTGTGA-
 T C G A A T C G C G A T A C T G A C T G C G T A G T C A G T A C C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T