Information for 12-TGCAGCATGTTACAGC (Motif 31)

C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C
Reverse Opposite:
C A T G G A T C C G A T A T C G G A C T G T C A C G T A A G T C G T C A A G C T C A T G T A G C C A G T C T A G T A G C G C T A
p-value:1e-6
log p-value:-1.577e+01
Information Content per bp:1.670
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif41.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.5 +/- 21.2bp
Average Position of motif in Background43.2 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGCATGTTACAGC--
RTTKCADNNKRTTGCATNAN
 A C G T A C G T C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCAGCATGTTACAGC-
--CAGCATGACTCAGCA
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C A C G T
A C G T A C G T G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCAGCATGTTACAGC-----
----TCNCTTTACAGCGNNNT
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGCAGCATGTTACAGC
-----NTTGATACATT
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCAGCATGTTACAGC
-GKVTCADRTTWC---
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C
A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAGCATGTTACAGC-----
----TCNNTTTACAGCGNNNT
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAGCATGTTACAGC-----
----TCNNTTTACAGCGNNNT
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGCAGCATGTTACAGC
-----NATGTTGCAA-
 C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCATGTTACAGC
CCACACAGCAGGAGA----
 A C G T A C G T A C G T C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGCAGCATGTTACAGC
ATGCAACAGGTGG----
 A C G T C A G T A T C G A G T C G C T A A C T G G T A C C T G A C A G T C T A G G A C T A C G T C T G A A T G C C G T A C T A G G T A C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T