Information for 9-GCAGCTGCTGCACATA (Motif 17)

A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T T C G A A C G T T A C G C G A T A T C G A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.1 +/- 33.0bp
Average Position of motif in Background55.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCTGCACATA
AGCAGCTGCTNN-----
 A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCTGCTGCACATA
NNNNAGCAGCTGCTGAN----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGCTGCACATA
AGCAGCTGCT-------
 A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAGCTGCTGCACATA
NCAGCTGCTG------
 A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCTGCACATA
CGCAGCTGCG-------
 A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCTGCACATA
TGCAGCTGTCCCT----
 A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCTGCACATA
NNGCAGCTGTC-------
 A C G T A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCTGCACATA
NNGCAGCTGTT-------
 A C G T A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCAGCTGCTGCACATA
-CAGCTGNT-------
 A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTGCTGCACATA
NNACAGCTGC--------
 A C G T A C G T A C T G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A C T G A T G C C G T A A G T C C G T A A C G T C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T