Information for 6-GGACACAAAGGCA (Motif 14)

C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
Reverse Opposite:
C G A T T A C G A G T C A G T C A C G T A G C T A C G T A C T G A C G T A T C G A G C T G T A C G A T C
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.792
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.9 +/- 26.4bp
Average Position of motif in Background49.6 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGACACAAAGGCA
-AAAACAAAGG--
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGACACAAAGGCA-
AAACAGACAAAGGAAT
 A C G T A C G T C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGACACAAAGGCA
---AACAAAGG--
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGACACAAAGGCA
---RACAAWGG--
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGACACAAAGGCA
-VRRACAAWGG--
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGACACAAAGGCA-
CTCACACAATGGCGC
 A C G T C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGACACAAAGGCA
-GGAACAAAGR--
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGACACAAAGGCA
----ACAAAG---
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGACACAAAGGCA
--RAACAATGGN-
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGACACAAAGGCA
-AAAACAATGG--
 C T A G A C T G C T G A A T G C C G T A T A G C C G T A C T G A C G T A C T A G T C A G A G T C C G T A
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T