Information for 2-BCCGCCGCTGCTT (Motif 4)

A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
Reverse Opposite:
G T C A C T G A A C T G G T A C C G T A A C T G A G T C C T A G A C T G A G T C A C T G A C T G T A C G
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.852
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 19.3bp
Average Position of motif in Background62.7 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:BCCGCCGCTGCTT
--CGCAGCTGCG-
 A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-BCCGCCGCTGCTT---
CTCAGCAGCTGCTACTG
 A C G T A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:BCCGCCGCTGCTT
NNAGCAGCTGCT-
 A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:BCCGCCGCTGCTT
--AGCAGCTGCT-
 A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:BCCGCCGCTGCTT
-NNGCAGCTGTC-
 A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:BCCGCCGCTGCTT
-CAGCAGCTGN--
 A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----BCCGCCGCTGCTT
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----BCCGCCGCTGCTT
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:BCCGCCGCTGCTT
-NNGCAGCTGTT-
 A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--BCCGCCGCTGCTT
GCCCCGCCCCCTCCC
 A C G T A C G T A T G C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C