Information for 9-CCAGGCTTACCCT (Motif 17)

A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G C G A T C T G A C G T A A C T G A G T C G T A C A C G T C T A G A C T G
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 30.1bp
Average Position of motif in Background17.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCTTACCCT--
TCTTTGGCGTACCCTAA
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAGGCTTACCCT
-CAAGCTT-----
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
--NNACTTACCTN
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
-NGGGATTA----
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
CNAGGCCT-----
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
---GGATTAGC--
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
-VRGGATTARN--
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
CTAGGCCT-----
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
--NGGATTAN---
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCAGGCTTACCCT
--NGGATTAA---
 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G C T C G T A G T A C A G T C A G T C A C G T
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T