Information for 5-GAAGCACTTG (Motif 13)

A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G
Reverse Opposite:
A G T C G C T A G T C A C T A G A C G T C T A G G T A C A G C T A G C T A T G C
p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.825
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif128.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets43.9 +/- 29.7bp
Average Position of motif in Background50.8 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GAAGCACTTG-
-AAGCACTTAA
 A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAAGCACTTG--
--ACCACTTGAA
 A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAAGCACTTG-
-AAGCACATGG
 A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCACTTG---
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAAGCACTTG-
-MRSCACTYAA
 A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAAGCACTTG--
---CCACTTGAA
 A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCACTTG
NGAAGC-----
 A C G T A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAAGCACTTG
AGGAAACAGCTG
 A C G T A C G T A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAAGCACTTG----
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAAGCACTTG----
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A T C G C T G A C T G A A C T G G A T C C G T A A G T C C A G T C G A T T C A G A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G