Information for 4-GAGGCGAGAG (Motif 11)

T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G
Reverse Opposite:
T A G C C A G T A G T C G A C T T G A C A T C G A G T C A T G C C G A T A G T C
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.654
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif12.34%
Number of Background Sequences with motif2939.7
Percentage of Background Sequences with motif6.38%
Average Position of motif in Targets51.2 +/- 26.0bp
Average Position of motif in Background50.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGGCGAGAG-
AAGGCAAGTGT
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGGCGAGAG--
-GGGCGGGAAGG
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGGCGAGAG--
-GGGCGGGAAGG
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGGCGAGAG--
--GGCGGGAARN
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGGCGAGAG---
-TGGCGGGAAAHB
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGCGAGAG
-AGGTGTGA-
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGGCGAGAG
CWGGCGGGAA
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGCGAGAG
-AGGTGTGA-
 T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGCGAGAG-
BTKGGCGGGAAA
 A C G T T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGCGAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A C G T T C A G G C T A T A C G T C A G T A G C A C T G C T G A T C A G G T C A A T C G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G