p-value: | 1e-5 |
log p-value: | -1.380e+01 |
Information Content per bp: | 1.915 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.35% |
Number of Background Sequences with motif | 2.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 58.7 +/- 26.9bp |
Average Position of motif in Background | 61.9 +/- 10.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 2.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCTTCGTTGAGG -CCTTTGTT---- |
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GLIS3/MA0737.1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCCTTCGTTGAGG--- --CTTCGTGGGGGGTC |
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GLIS1/MA0735.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCCTTCGTTGAGG---- -GCTTCGTGGGGGGTCT |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCTTCGTTGAGG -GCTTCC------ |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCCTTCGTTGAGG ---ANCGTTTANN |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCTTCGTTGAGG -YCTTTGTTCC-- |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCTTCGTTGAGG- NNNTCCTTTGTTCTNNN |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCTTCGTTGAGG- TNNTCCTTTGTTCTNNT |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCTTCGTTGAGG -CCWTTGTY---- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCTTCGTTGAGG NCCATTGTTC--- |
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