Information for 4-RCCCYTTRCTGCCTTY (Motif 9)

C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A C T A G A C T G A G T C C G T A A C T G A G T C G T C A C G T A C T G A A C T G C T A G C T A G A G T C
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.882
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 31.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RCCCYTTRCTGCCTTY-----
---CCTTCCTTCCTTCCTTCC
 C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

PAX5/MA0014.2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---RCCCYTTRCTGCCTTY
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------RCCCYTTRCTGCCTTY
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-RCCCYTTRCTGCCTTY
TGACCTTTCGTGACCTT
 A C G T C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:RCCCYTTRCTGCCTTY
--CACTTCCTGT----
 C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:RCCCYTTRCTGCCTTY
-----TTCCCGCCWG-
 C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:RCCCYTTRCTGCCTTY--
-----TTACTTCCTNGTN
 C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-RCCCYTTRCTGCCTTY
GACCCCCCGCTGCGC--
 A C G T C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-RCCCYTTRCTGCCTTY
GACCCCCCGCTGTG---
 A C G T C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:RCCCYTTRCTGCCTTY
ACCACATCCTGT----
 C T A G A G T C A G T C A G T C A G C T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A G C T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T