Information for 2-GCACGCGGCCTCTGCG (Motif 5)

T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
Reverse Opposite:
A G T C C A T G A G T C G T C A A C T G C G T A A C T G A C T G A G T C A G T C A C T G A G T C A T C G A C G T A C T G A G T C
p-value:1e-12
log p-value:-2.993e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.7 +/- 16.5bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCACGCGGCCTCTGCG
GGCACGCGTC-------
 A C G T T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCACGCGGCCTCTGCG
GGGGCCGAGGCCTG----
 A C G T A C G T T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCACGCGGCCTCTGCG
---CNAGGCCT-----
 T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCACGCGGCCTCTGCG
---CTAGGCCT-----
 T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCACGCGGCCTCTGCG
--GCTCGGSCTC----
 T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCACGCGGCCTCTGCG
GTGCCACGCGACTG-----
 A C G T A C G T A C G T T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCACGCGGCCTCTGCG
-CACGTGGC-------
 T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCACGCGGCCTCTGCG
-CACGTGGN-------
 T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCACGCGGCCTCTGCG
-CACGCA---------
 T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCACGCGGCCTCTGCG
GGCACGTGNC-------
 A C G T T A C G A G T C C G T A A T G C T A C G G T A C A C T G A C T G A G T C G T A C A C G T A G T C A C G T A C T G G A T C A C T G
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T