Information for 6-AGSACCKCGAKST (Motif 4)

C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G G T C A A C G T A G T C A T C G G T A C A C T G A C T G C G A T A T C G A G T C A G C T
p-value:1e-12
log p-value:-2.993e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 24.3bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGSACCKCGAKST-----
GAAGTANCACGAATNMRAGT
 A C G T A C G T C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

MAX::MYC/MA0059.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGSACCKCGAKST-
---ACCACGTGCTC
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGSACCKCGAKST-
---ACCCGGATGTA
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T A C G T
A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGSACCKCGAKST
ATGACCTTGAA--
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGSACCKCGAKST--
---GCCGCCATCTTG
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGSACCKCGAKST
---GGCACGTGCC
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGSACCKCGAKST
NATGACCTTGA---
 A C G T C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGSACCKCGAKST
GGGAGGACNG------
 A C G T A C G T A C G T C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGSACCKCGAKST
-AAACCGCAA---
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGSACCKCGAKST
---ANCAGGATGT
 C T G A A C T G A T G C C G T A A G T C A G T C A C T G A T G C A C T G C G T A A C G T A T G C A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T