Information for 8-ACTTGACCGG (Motif 19)

C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
Reverse Opposite:
A T G C G T A C A C T G A C T G C G A T A T G C C G T A C T G A A C T G C G A T
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.2 +/- 25.5bp
Average Position of motif in Background49.7 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGACCGG
TCACGTGACCGG
 A C G T A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGACCGG-----
NNCNTGACCCCGCTCT
 A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACTTGACCGG
--TTGACAGC
 C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACTTGACCGG
CCACTTGAA---
 A C G T A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGACCGG
TGACCTTGACCT-
 A C G T A C G T A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGACCGG-----
NNNNTGACCCGGCGCG
 A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACTTGACCGG
---TGACCT-
 C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTGACCGG
GCCACGTGACC--
 A C G T A C G T A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTGACCGG
ACCACTTGAA---
 A C G T A C G T A C G T C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACTTGACCGG----
ACATGCCCGGGCAT
 C G T A A G T C A G C T A C G T A T C G C G T A A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T