Information for 7-TCGCTGAGCG (Motif 17)

A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C T G C G T A
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 21.7bp
Average Position of motif in Background52.4 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCGCTGAGCG
AATTTGCTGAC--
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTGAGCG--
NNGCNCTGCGCGGC
 A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGCTGAGCG
CCTGCTGAGH-
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGCTGAGCG
-NGCTN----
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCGCTGAGCG---
--CTTGAGTGGCT
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCGCTGAGCG
---CGGAGC-
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCGCTGAGCG
--GCTGTG--
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCGCTGAGCG
AAAATGCTGACT-
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCGCTGAGCG-
-TGCTGACTCA
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCGCTGAGCG--
AAANTGCTGACTNAG
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G