Information for 1-AGCAGATTGA (Motif 5)

C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A
Reverse Opposite:
A G C T G T A C C G T A C T G A G A C T A T G C A C G T A C T G T A G C C G A T
p-value:1e-13
log p-value:-3.027e+01
Information Content per bp:1.788
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif97.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets46.7 +/- 30.1bp
Average Position of motif in Background50.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCAGATTGA
AACAGATGGC
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCAGATTGA
AACAGATGGT
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCAGATTGA
AACAKATGGY
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCAGATTGA----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGATTGA-----
NNANTGATTGATNNNN
 A C G T C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGATTGA-----
NNANTGATTGATNTTN
 A C G T C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCAGATTGA
--TTGATTGN
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCAGATTGA-------
--CTGATTGGTCNATTT
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCAGATTGA--
--CCGATTGGCT
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCAGATTGA
ANCAGCTG--
 C G T A A T C G G T A C C G T A A T C G C T G A G A C T C G A T A C T G T C G A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T