Information for 6-CCTTTTATAA (Motif 18)

T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A
Reverse Opposite:
A G C T A G C T C G T A A C G T C G T A C G T A G T C A C G T A C T A G A C T G
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.844
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif145.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets46.7 +/- 22.6bp
Average Position of motif in Background54.2 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CCTTTTATAA--
CCTTTTATAGNC
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTTATAA
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTTATAA
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCTTTTATAA--
--TTTTATTRGN
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T A C G T
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCTTTTATAA--
--TTTTATKRGG
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T A C G T
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTTTTATAA-
--TTTTATTGC
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCTTTTATAA-
-NTTTTATTGG
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCTTTTATAA-
-NTTTTATGAC
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTTTTATAA--
-NTTTTATTACN
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T A C G T
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCTTTTATAA---
--TTTTATGGCTN
 T G A C A G T C A C G T A C G T A C G T G A C T G T C A C G A T C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T