Information for 1-TCAGSTGAAAAARATT (Motif 1)

A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
Reverse Opposite:
C T G A C G T A C G A T A G C T A G C T C A G T A G C T A C G T G C A T A G T C G T C A T A C G T A G C C A G T C T A G T C G A
p-value:1e-15
log p-value:-3.657e+01
Information Content per bp:1.670
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 21.9bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT
-TACTGGAAAAAAAA-
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT----
---GTTAAAAAAAAAAATTA
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT
-CAATTGCAAAAATAT
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAGSTGAAAAARATT--
ACATCTGGWWTYAATTAR
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCAGSTGAAAAARATT
-----TGGAAAA----
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT----
---GTTCAAAAAAAAAATTC
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT
-AGCCGAAAAAAAAAT
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCAGSTGAAAAARATT
---NATGGAAAAN---
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT
AAATAAGAAAAAAC--
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TCAGSTGAAAAARATT----
------GCAAAACATTACTA
 A G C T A G T C G T C A A T C G A T G C A C G T C T A G C G T A C G T A C T G A G T C A C T G A T C G A C G T A C G A T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A