Information for 10-TGGTGAAAATTAC (Motif 20)

A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A G C T A C G T A C G T G A C T A G T C G T C A A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 20.1bp
Average Position of motif in Background67.7 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGTGAAAATTAC-
----GGAAATTCCC
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGTGAAAATTAC-
TGGAGGTAATTAAC
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C A C G T
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

Dlx1/MA0879.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGGTGAAAATTAC-
----CCTAATTATC
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

DLX6/MA0882.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGGTGAAAATTAC
-----CCAATTAC
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C

Dlx3/MA0880.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGTGAAAATTAC
-----CCAATTAC
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Dlx4/MA0881.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGTGAAAATTAC
-----CCAATTAC
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Dlx2/MA0885.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGTGAAAATTAC
-----GCAATTAA
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

Hoxd3/MA0912.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGTGAAAATTAC---
TTGAGTTAATTAACCT
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGTGAAAATTAC---
TTGAGTTAATTAACCT
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0050.1_Hoxa3/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGTGAAAATTAC-
TTGAGGTAATTAGT
 A C G T A C T G A C T G A C G T A C T G C T G A C G T A C G T A C T G A C G A T A C G T C G T A A G T C A C G T
C A G T A G C T T A C G G T C A T C A G A T C G A G C T G T C A G T C A A C G T A C G T C T G A T C A G A G C T