p-value: | 1e-9 |
log p-value: | -2.271e+01 |
Information Content per bp: | 1.842 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.00% |
Number of Background Sequences with motif | 120.0 |
Percentage of Background Sequences with motif | 0.25% |
Average Position of motif in Targets | 58.2 +/- 28.1bp |
Average Position of motif in Background | 53.1 +/- 27.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCTGTAC CCCCCTGCTGTG- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCTGTAC-- NNTCCTGCTGTGNNN |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTGCTGTAC GGCCYCCTGCTGDGH |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCTGTAC-- TNTCCTGCTGTGNNG |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 5 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTGCTGTAC CCTGCTGAGH |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCTGTAC-- TCNCCTGCTGNGNNN |
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Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer
Match Rank: | 7 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGCTGTAC CCAGCTGTTN |
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Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGCTGTAC CAGCAGCTGN-- |
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Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCTGCTGTAC NAHCAGCTGD-- |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTGCTGTAC ANCAGCTG--- |
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