Information for 11-CTCCTAGCYRGGA (Motif 27)

T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A
Reverse Opposite:
A C G T A G T C G T A C G A C T C T G A A C T G A T G C G A C T T C G A T C A G T A C G C T G A A T C G
p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.640
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif367.1
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets48.3 +/- 22.7bp
Average Position of motif in Background49.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCCTAGCYRGGA
CCCCCTGCTGTG-
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCCTAGCYRGGA
GGCCYCCTGCTGDGH
 A C G T A C G T T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGCYRGGA---
-TCCCAGMCRAGCCCC
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCCTAGCYRGGA-----
-TGCTTTCTAGGAATTCA
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGCYRGGA
GCTCCG--------
 A C G T T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGCYRGGA--
-NGCTTTCTAGGAAN
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CTCCTAGCYRGGA
CNGTCCTCCC--------
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTCCTAGCYRGGA-------
----CTACTAGGATGTNNTN
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTCCTAGCYRGGA--
----CTTCTGGGAAA
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTCCTAGCYRGGA--
TCNCCTGCTGNGNNN
 T A G C A G C T A T G C A G T C A G C T C T G A T A C G T G A C G A C T C T G A A C T G C T A G T G C A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G