Information for 7-AGGAAAAAGGKCT (Motif 19)

C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
Reverse Opposite:
C G T A C A T G G T A C G T A C G T A C C G A T A C G T G A C T A C G T A C G T A G T C A G T C A G C T
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.737
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets57.9 +/- 27.5bp
Average Position of motif in Background44.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGGAAAAAGGKCT-
NNAGGGACAAGGGCNC
 A C G T A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGAAAAAGGKCT
TAGGGCAAAGGTCA
 A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGAAAAAGGKCT
GTAGGGCAAAGGTCA
 A C G T A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGAAAAAGGKCT
TGGGGCAAAGGTCA
 A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AGGAAAAAGGKCT
NNNNGGGGGAAGANGG---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGAAAAAGGKCT
GAGGTCAAAGGTCA
 A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGAAAAAGGKCT
GAGGTCAAAGGTCA
 A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGAAAAAGGKCT
AGGGGTCAGAGGTCA
 A C G T A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGAAAAAGGKCT
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGAAAAAGGKCT--
-GGAGAAAGGTGCGA
 C T G A A C T G T C A G T G C A C G T A C T G A T G C A C G T A A C T G A C T G A C T G G T A C C G A T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A