Information for 3-CSTCAGCCTGGCTCCA (Motif 14)

A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
Reverse Opposite:
A C G T C T A G A T C G C T G A A C T G G A T C A T G C C G T A A C T G A C T G T A G C G A C T A T C G T G C A A T C G A T C G
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.664
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.0 +/- 27.3bp
Average Position of motif in Background58.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CSTCAGCCTGGCTCCA
---CAGCC--------
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CSTCAGCCTGGCTCCA
---CTGTCTGTCACCT
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CSTCAGCCTGGCTCCA
----GGCCCCGCCCCC
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-9
Orientation:forward strand
Alignment:---------CSTCAGCCTGGCTCCA
GAGCCTGGTACTGWGCCTGR-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CSTCAGCCTGGCTCCA---
--TAAGCCACGCCCCCTTT
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A A C G T A C G T A C G T
A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CSTCAGCCTGGCTCCA---
----TGCCTGCGYCMCCTT
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CSTCAGCCTGGCTCCA
--BCAGACWA------
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CSTCAGCCTGGCTCCA
DCTCAGCAGG------
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CSTCAGCCTGGCTCCA
----GGCCACRCCCMK
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
A C G T A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CSTCAGCCTGGCTCCA
----TGTCTGDCACCT
 A T G C T A G C A C G T A T G C C G T A A C T G A G T C G T A C G A C T A T C G C T A G A G T C G A C T A T G C A G T C T G C A
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T