Information for 5-TTATGATCAC (Motif 12)

G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G C G T A A C G T A G T C C G T A C G A T C G T A C G T A
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.818
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif42.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets45.2 +/- 23.4bp
Average Position of motif in Background44.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TTATGATCAC--
TAATGATGATCACTA
 A C G T A C G T A C G T G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTATGATCAC----
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTATGATCAC------
NNNNTGAGCACTGTNNG
 A C G T G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

MEOX2/MA0706.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTATGATCAC-
-NTTAATTACN
 G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTATGATCAC
--ATAATCCC
 G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTATGATCAC--
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTATGATCAC-
WWTRTAAACAVG
 A C G T G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTATGATCAC
-TTTAAT---
 G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTATGATCAC--
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A C G T G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTATGATCAC--
--ATTAACACCT
 G C A T C G A T C G T A C G A T C T A G C G T A C G A T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T