Information for 2-GCAGATGCTC (Motif 2)

C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
Reverse Opposite:
C A T G C G T A A C T G T A G C T C G A G A C T A G T C A C G T A C T G G A T C
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.656
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.77%
Number of Background Sequences with motif1133.0
Percentage of Background Sequences with motif2.37%
Average Position of motif in Targets44.9 +/- 30.8bp
Average Position of motif in Background50.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATGCTC
AGCAGCTGCT-
 A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATGCTC
AACAGATGGT-
 A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GCAGATGCTC---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GCAGATGCTC
NNVVCAGCTGBN-
 A C G T A C G T A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCAGATGCTC
SDGCAGGTGCNS
 A C G T A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GCAGATGCTC---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCAGATGCTC
CGCAGCTGCG-
 A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATGCTC-
AACAGATGGTCN
 A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C A C G T
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATGCTC
NNCAGGTGTN-
 A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATGCTC
TCCAGATGTT-
 A C G T C T A G T G A C T G C A T C A G C T G A A G C T A T C G T G A C G C A T G T A C
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T