Information for 6-ATCCTGCACT (Motif 18)

C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T
Reverse Opposite:
T G C A T C A G A G C T C A T G T G A C C G T A C T A G A C T G G C T A G A C T
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.665
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif488.6
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets55.1 +/- 25.3bp
Average Position of motif in Background50.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCCTGCACT
ACATCCTGNT--
 A C G T A C G T C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATCCTGCACT---
---MRSCACTYAA
 C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATCCTGCACT----
-----CCACTTGAA
 C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTGCACT
GGTCCCGCCC-
 A C G T C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATCCTGCACT----
----NSCACTYVAV
 C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATCCTGCACT
NNAYTTCCTGHN--
 A C G T A C G T A C G T A C G T C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATCCTGCACT
ATAATCCC-----
 A C G T A C G T A C G T C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATCCTGCACT----
----RSCACTYRAG
 C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATCCTGCACT---
-----GCACTTAA
 C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATCCTGCACT----
----ACCACTTGAA
 C T G A C G A T T G A C G A T C G C A T A C T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A