Information for 3-ATGATTTGTAAAATTC (Motif 16)

G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
Reverse Opposite:
A C T G G C T A C G T A A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A C G A T G T A C C T G A A C G T
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.4 +/- 32.4bp
Average Position of motif in Background47.2 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC-
--CAATTGCAAAAATAT
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
---GGTCGTAAAAA--
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
----GTCGTAAAAA--
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
---GGTCGTAAAATT-
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
---AGTCGTAAAAA--
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATGATTTGTAAAATTC
TNNNATGATTTCNNCNN---
 A C G T A C G T A C G T A C G T G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
AAACCTCGTAAAATTT
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
---GGTCGTAAAAT--
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGATTTGTAAAATTC
CTAATTTGCATATT--
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATGATTTGTAAAATTC
---GCTCGTAAAAA--
 G T C A A G C T A C T G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C A G T G T A C
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T