Information for 1-CCCTAAACGG (Motif 1)

A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G
Reverse Opposite:
A T G C A G T C C T A G A C G T A C G T A C G T G T C A C T A G A C T G C T A G
p-value:1e-11
log p-value:-2.625e+01
Information Content per bp:1.871
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.4 +/- 21.2bp
Average Position of motif in Background44.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCCTAAACGG-
-GCTAAACGGT
 A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCCTAAACGG---
---NHAACBGYYV
 A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTAAACGG--
CCATATATGGNA
 A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAAACGG
GNCTATAAAAGG
 A C G T A C G T A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTAAACGG-
-GCTAATTGCT
 A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

MF0008.1_MADS_class/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCTAAACGG
CCATATATGG
 A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

PB0078.1_Srf_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAACGG--
TTCCATATATGGAA
 A C G T A C G T A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTAAACGG-
--CTAATCGNT
 A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

MYBL1/MA0776.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCTAAACGG-
ACCGTTAACGGT
 A C G T A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAACGG
NGYCATAAAWCH
 A C G T A C G T A G T C A G T C A G T C C A G T C G T A C G T A C G T A A G T C A C T G A T C G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A