Information for 12-GWWKGTTAAARTA (Motif 24)

C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A
Reverse Opposite:
A C G T C T G A A G T C A C G T A C G T A C G T C G T A C G T A A G T C G T C A C G A T C G A T A G T C
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 15.2bp
Average Position of motif in Background50.1 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GWWKGTTAAARTA---
TGATTGTTAACAGTTGG
 A C G T C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GWWKGTTAAARTA
GAAAGTGAAAGT-
 C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GWWKGTTAAARTA-
AGAAAGTGAAAGTGA
 A C G T C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GWWKGTTAAARTA--
NNNTTAGTTAACTNANN
 A C G T A C G T C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GWWKGTTAAARTA---
-ATGCTAAAAATAGAA
 C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GWWKGTTAAARTA
GAAAGTGAAAGT-
 C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GWWKGTTAAARTA--
---DCYAAAAATAGM
 C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GWWKGTTAAARTA---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GWWKGTTAAARTA
-TTTGTTTACTTA
 C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GWWKGTTAAARTA
GGTCGTAAAATT-
 C T A G C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A C G T A C T A G A G C T C G T A
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T