Information for 9-CTAGCACAGG (Motif 21)

A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G
Reverse Opposite:
T G A C A G T C C A G T A T C G C G A T A C T G A G T C G A C T T G C A A C T G
p-value:1e-6
log p-value:-1.510e+01
Information Content per bp:1.749
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif285.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets55.5 +/- 33.4bp
Average Position of motif in Background48.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTAGCACAGG
CCAGGAACAG-
 A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTAGCACAGG-
NGNTCTAGAACCNGV
 A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTAGCACAGG
----CACAGN
 A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAGCACAGG---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCACAGG
TGTCTGDCACCT-
 A C G T A C G T A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGCACAGG--
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTAGCACAGG
CTGTCTGTCACCT-
 A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAGCACAGG------
CAATCACTGGCAGAAT
 A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAGCACAGG
CTTGGCAA---
 A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAGCACAGG-----
CGAAGCACACAAAATA
 A C G T A G T C A C G T C T G A C T A G A G T C C G T A A T G C G T C A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A