Information for 4-CCGAAAAGGA (Motif 13)

A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A
Reverse Opposite:
C G A T A G T C A G T C A C G T A C G T A C G T A C G T G T A C T A C G C T A G
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.846
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif108.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets52.1 +/- 22.4bp
Average Position of motif in Background54.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF7/MA0772.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCGAAAAGGA----
ACGAAAGCGAAAGT
 A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A A C G T A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGAAAAGGA-
-NNATAAGGNN
 A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCGAAAAGGA---
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGAAAAGGA
CAGATAAGGN
 A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGAAAAGGA--
ANGNAAAGGTCA
 A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGAAAAGGA
NAGATAAGNN
 A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

IRF8/MA0652.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCGAAAAGGA----
TCGAAACCGAAACT
 A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A A C G T A C G T A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGAAAAGGA
ANAGATAAGAA
 A C G T A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGAAAAGGA
NVAGATAAGR-
 A C G T A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCGAAAAGGA---
NCAGATAAGAANNN
 A C G T A G T C A T G C C A T G G T C A G T C A C G T A C G T A C T A G C T A G C G T A A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T