Information for 6-AAATKCAAATTCAGAA (Motif 9)

C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
Reverse Opposite:
A G C T C G A T G T A C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C T G G T C A T C G A A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 20.4bp
Average Position of motif in Background78.0 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAATKCAAATTCAGAA
ATATGCAAATNNN---
 C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATKCAAATTCAGAA
ATATGCAAAT------
 C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAATKCAAATTCAGAA
TTATGCAAAT------
 C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAATKCAAATTCAGAA
-NATTCAAAT------
 C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAATKCAAATTCAGAA
GGAAANTGAAACTNA---
 A C G T A C G T C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAATKCAAATTCAGAA
TTGTATGCAAATTAGA--
 A C G T A C G T C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAATKCAAATTCAGAA
GAAAGTGAAAGT-----
 A C G T C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAATKCAAATTCAGAA
GAAACTGAAACT-----
 A C G T C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAATKCAAATTCAGAA
GAAAMTGAAACT-----
 A C G T C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATKCAAATTCAGAA
AATATGCAAATT-----
 A C G T C G T A C G T A G T C A A C G T C A G T G T A C C G T A C G T A C G T A C G A T C G A T T A G C C G T A A C T G C G T A T C G A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T