Information for 2-CCTTCAAAGC (Motif 12)

A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
Reverse Opposite:
C T A G T G A C G A C T A C G T A C G T A T C G T G C A T C G A C T A G T C A G
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.555
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif10.52%
Number of Background Sequences with motif2516.5
Percentage of Background Sequences with motif5.25%
Average Position of motif in Targets44.5 +/- 26.6bp
Average Position of motif in Background50.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCTTCAAAGC-
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTTCAAAGC
ACATCAAAGG
 A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTTCAAAGC
ACWTCAAAGG
 A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCTTCAAAGC-
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTCAAAGC
GCTTCC----
 A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTTCAAAGC-
CCTTTTATAGNC
 A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCAAAGC
TGACCTTGAN---
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCTTCAAAGC
ATGACCTTGAA---
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCAAAGC
TGACCTTGAV---
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTCAAAGC--
AAAGATCAAAGGAA
 A C G T A C G T A G T C A G T C A G C T A C G T T A G C T G C A T G C A C T G A A C T G G A T C A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A